Pathogenwatch
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On this page
  • About The Map View
  • Using The Map View
  1. How to use Pathogenwatch
  2. Using The Interactive Collection Views

The Map View

PreviousUsing The Interactive Collection ViewsNextThe Tree Viewer

Last updated 7 years ago

About The Map View

The map view plots the locations of all assemblies that have been provided with latitude and longitude coordinates.

Using The Map View

  • Assemblies in the same location are shown as a single white circle.

  • Selecting a circle will highlight the respective leaves on the tree and filter the rows below.

  • When an AMR column is selected, the circle will be coloured in ratio of resistance/intermediate/sensitive phenotype (red/yellow/white) or present/absent (red/white) genotype. The circle in the top left shows the overall ratios for the selected resistance phenotype or genotype.

  • The group selection tool allows you to draw a line around a set of points to select. These are then highlighted in the tree and and metadata tables as above.

  • Other controls:

    • You can also adjust the marker sizes after clicking the map controls button,

    • zoom in or out (swipe gestures work if using a touchpad),

    • move the map around,

    • and download an image by right-clicking on the map.

Assemblies that have been selected in the or will be highlighted with a purple ring.

📖
Tree Viewer
Metadata Tables
Selected Assemblies Coloured By Ciprofloxacin Resistance