The Map View

About The Map View

The map view plots the locations of all assemblies that have been provided with latitude and longitude coordinates.

Selected Assemblies Coloured By Ciprofloxacin Resistance

Using The Map View

• Assemblies in the same location are shown as a single white circle.

• Selecting a circle will highlight the respective leaves on the tree and filter the rows below.

• Assemblies that have been selected in the Tree Viewer or Metadata Tables will be highlighted with a purple ring.

• When an AMR column is selected, the circle will be coloured in ratio of resistance/intermediate/sensitive phenotype (red/yellow/white) or present/absent (red/white) genotype. The circle in the top left shows the overall ratios for the selected resistance phenotype or genotype.

• The group selection tool allows you to draw a line around a set of points to select. These are then highlighted in the tree and and metadata tables as above.

• Other controls:

  • You can also adjust the marker sizes after clicking the map controls button,

  • zoom in or out (swipe gestures work if using a touchpad),

  • move the map around,

  • and download an image by right-clicking on the map.