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  • About
  • Method
  • How to cite
  1. Technical Descriptions
  2. Sequence Typing Methods

PopPUNK

S. pneumoniae GPSC strain assignment

PreviousPangolinNextSeroBA

Last updated 10 months ago

About

Method

PopPUNK uses a K-mer based algorithm to rapidly search a query genome against the reference database. Each cluster is identified by a numerical code. For full technical details, please follow the link to their .

How to cite

If you use the results from PopPUNK in a publication, please do cite the original paper: .

📖
website and documentation
John A Lees et al (2019)